[6gPddlmZddlmZmZddlmZddlm Z ddl m Z ej dZ ej dZej dZd Zdd Zdd ZdZdZdZdZdZddZdZdZdZ d dZdS)!)Number) exceptionsoptional_importsN) graph_objs) make_subplotspandasnumpyz scipy.statsct|t}t|}t|}t|dd}t|dd}t|dd}||z }d|z}t||||z k} t||||zk} |||||| | d S) z6 Calculate statistics for use in violin plot. 2linear) interpolationlowerKhigher?)minmaxq1q2q3d1d2)npasarrayfloatrr percentile) dataxvals_minvals_maxrrriqr whisker_distrrs \/var/www/surfInsights/venv3-11/lib/python3.11/site-packages/plotly/figure_factory/_violin.py calc_statsr% s 4AvvayyHvvayyH q"H 5 5B q"G 4 4B q"H 5 5B r'C9L !\)*+ , ,B !\)*+ , ,B  #1f77b4 rgb(0, 0, 0)cfdttD}tjdd|d|tjd|ddd S) zG Produces a sideways probability distribution fig violin plot. cg|]B}dd|zdzd|zdzCS)z (pdf(y), y)=({:0.2f}z, ))format).0irys r$ z$make_half_violin..-sb     )**1Q400047):J:J1Q4:P:PPSVV   r&linestonextxg?spline)widthcolorshapetext) rr0modenamer9fill fillcolorline hoverinfoopacity)rangelenrScatterscatterLine)rr0r= linecolorr9s`` r$make_half_violinrG)s     s1vv   D         $ $3ix $ P P    r&c tj|| |z gt|ztj|dddddS)z2 Returns a rugplot fig for a violin plot. z line-ew-open)r7symbolmarkersr3Fr0)r0rmarkerr:r; showlegendr?)rrCrBrDMarker)valspdf_maxdistancer7s r$make_violin_rugplotrQ@s^    8h  #d)) +!((u^(LL     r&c ztjddg||gddtjddS)z? Returns the scatterplot fig of most of a violin plot. rr3r2r rgb(0,0,0)r6r7)rr0r;r:r>)rrCrDrE)rrs r$make_non_outlier_intervalrUOsK   a& r(     $ $3l $ C C    r&c tjddg||gdd|zdd|zgdtjddd S) z@ Makes the upper and lower quartiles for a violin plot. rzlower-quartile: r+zupper-quartile: r2rSrTr9)rr0r9r:r>r?)rrCr-rDrE)rrs r$make_quartilesrX\s~   a& r( !1!1"!5!5 5 !1!1"!5!5 5    $ $1L $ A A    r&c tjdg|gdd|zgdtddd S) z; Formats the 'median' hovertext for a violin plot. rzmedian: r+rJsquarezrgb(255,255,255))rIr7r9)rr0r9r:rKr?)rrCr-dict)rs r$ make_medianr\msX   # $9++B/// 0 8+=>>>    r&c Ttj||dddddd}|S)z- Makes the x-axis for a violin plot. Fr3)titlerAshowgridzerolineshowlinemirrorticksshowticklabels)rlayoutXAxis) xaxis_title xaxis_rangexaxiss r$ make_XAxisrj{s@   # # $  E Lr&c Ttj|ddddddd}|S)z- Makes the y-axis for a violin plot. TrWF)r^rd autorangeticklenrar`r_rb)rreYAxis) yaxis_titleyaxiss r$ make_YAxisrqs@   # # $  E Lr&TcLt|t}t|d}t|d}t|d}t|d}t|d}t|d}t|d} t|} t||d} | | } t| } |rd | zd z nd }| |z d z | d zg}t| | | t| | | t|| t||t|g}|r&| t|| ||||fS)z? Refer to FigureFactory.create_violin() for docstring. rrrrrrrdg@ rg?)r=)rPr7)rrrr% scipy_stats gaussian_kdelinspacerrGrUrXr\appendrQ)rNr=rugplotr r!rrrrrpdfxxyymax_pdfrP plot_xrange plot_datas r$ violinplotrs ::dE " "D$&H$&H D  $ B D  $ B D  $ B D  $ B D  $ B  " "4 ( (C Xx - -B RBffRjjG'.5g ##AH8h&,gm???M  Jr&c g} ||D]} | | vr| | |r| | D]} | |vrtjd||g}t | }t d|ddd}tj|dtj }tj|dtj }g}|D]}|||t|}t|}t| D]\}}t|||t }|||z ||z z }tj|||}t%|d|| \}}t)j}|D]}||d|dz|d d |dzt1| ||i t)jdgdgd t5d ||d|dgd|dggdd} || d||d ddt7di|d | ddd|| |S)zr Refer to FigureFactory.create_violin() for docstring. Returns fig for violin plot with colorscale. zRAll values/groups in the index column must be represented as a key in group_stats.rTrFrrzrgb{}rrerrJ)sizecmincmax colorscale showscale)rr0r:rKrLrr3rr)rxrr PlotlyErrorrrBrclrs color_parser unlabel_rgbrrrrrrrfind_intermediate_colorrr-rrrrrjrCr[rq)!rrrrrrryrrr6r^rr;grouprrrlowcolor highcolorgroup_stats_valueskey max_value min_valuerrrNintermedintermed_colorrr~rer trace_dummys! r$violin_colorscalers[*J\"$$ z ! !   d # # #   # #(+  $ |n % %B JA  QTePU   C  D,<==H!&)T-=>>I44!!+c"23333&''I&''I:&&  2zz",,r**;7?? Oi/I 4IJ5h 8TT!+ GNN>::G" " "  ;"$$ - -D   T1a!e , , , , H    a!e $ $jA &L&L M    $ # # F1IF1I7       K[!Q'''M)**1--z"~~>???M  Jr&c g} ||D]} | | vr| | |r| | D]} | |vrtjd||g}t | }t d|ddd}t| D]\}}t | ||t}t||||\}}tj}|D]}||d|dz|dd |dzt%| ||i|dd dt'd i|d| dd d|| |S)rzMIf colors is a dictionary, all the group names must appear as keys in colors.rTrFrrrerrr3rr)rxrrrrrBrrrrrrrrrrrr-rjrq)rrrrrrryrrr6r^rr;rrrrrrrNrr~rers r$ violin_dictrns#*J\"$$ z ! !   d # # #    ("   |n % %B JA  QTePU   C:&&   2zz",,r**;7??!+DF2JPW!X!X!X ;"$$ - -D   T1a!e , , , , H    a!e $ $jA &L&L M    M)**1--z"~~>???M  Jr&FXViolin and Rug Plotc t|trtj|d} ntj|d} |}t|t rTt |dkrtjdtd|DstjdtrYt|tj j j r5|tjd||j}t!|| d|\} } t#j| d t"jd |d | t+d | t-d d  }|dtd d d t#j| |}|St|tj j j stjd|tjd|d urKt| trt3|||| |||||| | }|St5|||| |||||| | }|St| trtjdt | dkrtjdt|tstjdt7|||| |||||| | }|S)a} **deprecated**, use instead the plotly.graph_objects trace :class:`plotly.graph_objects.Violin`. :param (list|array) data: accepts either a list of numerical values, a list of dictionaries all with identical keys and at least one column of numeric values, or a pandas dataframe with at least one column of numbers. :param (str) data_header: the header of the data column to be used from an inputted pandas dataframe. Not applicable if 'data' is a list of numeric values. :param (str) group_header: applicable if grouping data by a variable. 'group_header' must be set to the name of the grouping variable. :param (str|tuple|list|dict) colors: either a plotly scale name, an rgb or hex color, a color tuple, a list of colors or a dictionary. An rgb color is of the form 'rgb(x, y, z)' where x, y and z belong to the interval [0, 255] and a color tuple is a tuple of the form (a, b, c) where a, b and c belong to [0, 1]. If colors is a list, it must contain valid color types as its members. :param (bool) use_colorscale: only applicable if grouping by another variable. Will implement a colorscale based on the first 2 colors of param colors. This means colors must be a list with at least 2 colors in it (Plotly colorscales are accepted since they map to a list of two rgb colors). Default = False :param (dict) group_stats: a dictionary where each key is a unique value from the group_header column in data. Each value must be a number and will be used to color the violin plots if a colorscale is being used. :param (bool) rugplot: determines if a rugplot is draw on violin plot. Default = True :param (bool) sort: determines if violins are sorted alphabetically (True) or by input order (False). Default = False :param (float) height: the height of the violin plot. :param (float) width: the width of the violin plot. :param (str) title: the title of the violin plot. Example 1: Single Violin Plot >>> from plotly.figure_factory import create_violin >>> import plotly.graph_objs as graph_objects >>> import numpy as np >>> from scipy import stats >>> # create list of random values >>> data_list = np.random.randn(100) >>> # create violin fig >>> fig = create_violin(data_list, colors='#604d9e') >>> # plot >>> fig.show() Example 2: Multiple Violin Plots with Qualitative Coloring >>> from plotly.figure_factory import create_violin >>> import plotly.graph_objs as graph_objects >>> import numpy as np >>> import pandas as pd >>> from scipy import stats >>> # create dataframe >>> np.random.seed(619517) >>> Nr=250 >>> y = np.random.randn(Nr) >>> gr = np.random.choice(list("ABCDE"), Nr) >>> norm_params=[(0, 1.2), (0.7, 1), (-0.5, 1.4), (0.3, 1), (0.8, 0.9)] >>> for i, letter in enumerate("ABCDE"): ... y[gr == letter] *=norm_params[i][1]+ norm_params[i][0] >>> df = pd.DataFrame(dict(Score=y, Group=gr)) >>> # create violin fig >>> fig = create_violin(df, data_header='Score', group_header='Group', ... sort=True, height=600, width=1000) >>> # plot >>> fig.show() Example 3: Violin Plots with Colorscale >>> from plotly.figure_factory import create_violin >>> import plotly.graph_objs as graph_objects >>> import numpy as np >>> import pandas as pd >>> from scipy import stats >>> # create dataframe >>> np.random.seed(619517) >>> Nr=250 >>> y = np.random.randn(Nr) >>> gr = np.random.choice(list("ABCDE"), Nr) >>> norm_params=[(0, 1.2), (0.7, 1), (-0.5, 1.4), (0.3, 1), (0.8, 0.9)] >>> for i, letter in enumerate("ABCDE"): ... y[gr == letter] *=norm_params[i][1]+ norm_params[i][0] >>> df = pd.DataFrame(dict(Score=y, Group=gr)) >>> # define header params >>> data_header = 'Score' >>> group_header = 'Group' >>> # make groupby object with pandas >>> group_stats = {} >>> groupby_data = df.groupby([group_header]) >>> for group in "ABCDE": ... data_from_group = groupby_data.get_group(group)[data_header] ... # take a stat of the grouped data ... stat = np.median(data_from_group) ... # add to dictionary ... group_stats[group] = stat >>> # create violin fig >>> fig = create_violin(df, data_header='Score', group_header='Group', ... height=600, width=1000, use_colorscale=True, ... group_stats=group_stats) >>> # plot >>> fig.show() rgbNrzRIf data is a list, it must be nonempty and contain either numbers or dictionaries.c3@K|]}t|tVdS)N) isinstancer)r.elements r$ z create_violin..Ps,GGwz'622GGGGGGr&z0If data is a list, it must contain only numbers.zVdata_header must be the column name with the desired numeric data for the violin plot.rF )rr3r) r^rfontrrLr6rirprrp)rardrc)rrezGError. You must use a pandas DataFrame if you are using a group header.zFThe colors param cannot be a dictionary if you are using a colorscale.rzHcolors must be a list with at least 2 colors. A Plotly scale is allowed.z,Your group_stats param must be a dictionary.)rr[rvalidate_colors_dictvalidate_colorslistrBrrallpdcoreframe DataFramevaluestolistrrrreFontrjrqrFigurerrr)rrrrrrryrrr6r^ valid_colorsrr~rers r$ create_violinrs|V&$;0?? +FE::  dD ! ! 4yyA~~ ,/ GG$GGGGG  ,I  5*T27=#:;; 5" ,' $+2244D", LOW" " "  ;""''R'00R--R..     wtU5PRSSSTTTYv>>> $ 788 (    (,  U " ",-- !  "   *  "   ,--  ,* <  1$$ ,/ k400  ,E$  CJr&)r'r()r')r'T) NNNFNTFrrr)numbersrplotlyrr plotly.colorsrrplotly.graph_objsrplotly.subplotsr get_modulerrrur%rGrQrUrXr\rjrqrrrrrr&r$rs////////(((((())))))  **  ))))-88 8.       "   ""$"$"$"$"N@@@FdddNEEET     PPPPPPr&